SubtiBank SubtiBank
yoaW [2019-07-02 11:22:54]
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yoaW [2019-07-02 11:22:54]

unknown
locus
BSU18780
pI
5.16
mw
16.47 kDa
protein length
143 aa Sequence Blast
gene length
432 bp Sequence Blast
function
unknown
product
unknown
essential
no
synonyms
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      

categories

  • [category|SW 4|Lifestyles] → [category|SW 4.2|Sporulation] → [category|SW 4.2.1|Sporulation proteins] → [category|SW 4.2.1.4|Sporulation proteins/ other]
  • [category|SW 6|Groups of genes] → [category|SW 6.12|Secreted proteins]

    • Gene

    Coordinates
    2,046,980 2,047,411

    The protein

    Protein family

  • eamA transporter family (according to Swiss-Prot)

    • [SW|Localization]

  • cell membrane (according to Swiss-Prot)
  • extracellular (signal peptide) [Pubmed|18957862]

    • Expression and Regulation

    Operons

    genes
    [gene|71F01F20CF4E6E816BE2567B4287F93A99C9FF7D|yoaW]
    description
    [Pubmed|22383849]

    sigma factors

  • [protein|3CB24D493B3282278B7DC61CE3C793DFA815F9E2|SigE]: sigma factor, [Pubmed|3104598], in [regulon|3CB24D493B3282278B7DC61CE3C793DFA815F9E2|SigE regulon]

    • regulatory mechanism

  • [protein|E5110D9C36E8C55AFD1419987B14A53232165F20|AbrB]: repression, [Pubmed|15101989], in [regulon|E5110D9C36E8C55AFD1419987B14A53232165F20|AbrB regulon]

    • regulation

  • expressed during [SW|sporulation] in the mother cell ([protein|3CB24D493B3282278B7DC61CE3C793DFA815F9E2|SigE]) [Pubmed|3104598]
    • view in new tab

    Biological materials

    Mutant

  • MGNA-A304 (yoaW::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/304 NBRP B. subtilis, Japan]
  • 1A936 ( ''yoaW''::''cat''), [Pubmed|15101989], available at [http://pasture.asc.ohio-state.edu/BGSC/getdetail.cfm?bgscid=1A936&Search=1A936 BGSC]
  • BKE18780 ([gene|71F01F20CF4E6E816BE2567B4287F93A99C9FF7D|yoaW]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE18780 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CAAAAGAGTTCCTCCCGATA, downstream forward: _UP4_TAATAAAAAAGTATCTGGAT
  • BKK18780 ([gene|71F01F20CF4E6E816BE2567B4287F93A99C9FF7D|yoaW]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK18780 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CAAAAGAGTTCCTCCCGATA, downstream forward: _UP4_TAATAAAAAAGTATCTGGAT

    • References

  • 15101989,18957862,3104598,20709850,30732606